GEO2R - GEO - NCBI
Use GEO2R to compare two or more groups of Samples in order to identify genes that are differentially expressed across experimental conditions. Results are presented as a table of …
GEO2R: Analyze GEO Data - NCBI Video Vault - NCBI Bookshelf
Apr 23, 2012 · A tutorial on how to use GEO2R to analyze microarray data in GEO and retrieve a list of differentially expressed genes. Download transcript as a text file (4.6K) This video is also …
Frequently Asked Questions - GEO - NCBI
Aug 13, 2025 · Some RNA-seq studies and most microarray studies can be analyzed with GEO2R. GEO2R is a web application that can be used to compare 2 or more groups of …
NCBI GEO: archive for gene expression and epigenomics data sets: …
Jan 5, 2024 · This article presents the current status and recent advancements in GEO, including the generation of consistently computed gene expression count matrices for thousands of …
Search, Download, and Visualize Human RNA-Seq Gene …
Apr 19, 2023 · We have integrated the RNA-seq count matrix with the GEO2R tool, allowing you to compare gene expression in two or more groups of samples on the GEO web site. GEO2R …
The Gene Expression Omnibus database - PMC
In order to provide immediate, Web-based, and user-driven analysis for GEO data, GEO2R was developed. GEO2R is an interactive tool that enables the analysis of approximately 90% of …
GEO2R Venn diagram - GEO - NCBI
To download genes in a given region of the Venn diagram, select the relevant contrasts (see example). Data for up to 5 contrasts can be plotted. When >5 groups have been defined, …
National Center for Biotechnology Information
This video demonstrates how to use GEO2R to analyze microarray data and to retrieve to a list of differentially expressed genes. For this example, I’m going to analyze GEO Series GSE18388.
DExplore: An Online Tool for Detecting Differentially Expressed …
GEO2R is integrated into the NCBI Gene Expression Omnibus (GEO) database and can be easily used online to identify differentially expressed genes (DEGs) between two experimental …
NCBI GEO: archive for functional genomics data sets--update
This article reports current status and recent database developments, including the release of GEO2R, an R-based web application that helps users analyse GEO data.